source: heron_load/README.rst

heron-michigan
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1The Healthcare Enterprise Repository for Ontological Narration
2(HERON__) is a method to integrate clinical and biomedical data for
3translational research. It is developed by `KUMC Biomedical Informatics`__
4
5__ http://informatics.kumc.edu/work/wiki/HERON
6__ http://informatics.kumc.edu/
7
8Copyright (c) 2010-2013 University of Kansas Medical Center. See NOTICE file
9for disclaimer of warrantee and license details for this HERON open
10source codebase. ''The files in heron_load/curated_data are not
11part of the HERON open source codebase; see heron_load/curated_data/NOTICE
12for detais.''
13
14
15Heron ETL
16---------
17
18The main sources are:
19
20  - heron_load - automated ETL process, which runs after data is staged.
21    See HeronLoad__.
22
23
24__ http://informatics.kumc.edu/work/wiki/HeronLoad
25
26
27Developers
28----------
29
30Developers from the KUMC Medical Informatics team:
31
32 - Dan Connolly
33 - Arvinder Choudhary
34 - Russ Waitman
35 - Dongsheng zhu
36 - Tamara McMahon
37 - Mani Nair
38 - Nathan Graham
39
40
41Citating HERON
42--------------
43
44Please cite us as:
45
46  * Waitman LR, Warren JJ, Manos EL, Connolly DW.  `Expressing
47    Observations from Electronic Medical Record Flowsheets in an i2b2
48    based Clinical Data Repository to Support Research and Quality
49    Improvement`__.  AMIA Annu Symp Proc. 2011;2011:1454-63. Epub 2011
50    Oct 22.
51
52__ http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3243191/
53
54
55Acknowledgements
56----------------
57
58This work was supported by a CTSA grant from NCRR and NCATS__ awarded
59to the University of Kansas Medical Center for `Frontiers: The
60Heartland Institute for Clinical and Translational Research`__ #
61UL1TR000001 (formerly #UL1RR033179). The contents are solely the
62responsibility of the authors and do not necessarily represent the
63official views of the NIH, NCRR, or NCATS.
64
65__ http://www.ncats.nih.gov/
66__ http://frontiersresearch.org/
67
68
69Other contributions:
70 - relational_join.py by Jim Baker <jbaker@zyasoft.com>
71 - heron_staging/ssdmf/recordlayout.txt by National Technical Information
72   Service <info@ntis.gov>
73
74We make use of `Percentile Data Files with LMS Values`__ from the CDC.
75
76__ http://www.cdc.gov/growthcharts/percentile_data_files.htm
77
78
79Version Control
80---------------
81
82This mercurial repository was created 2010-06-15 with revision
8363da9a4d8111.
84
85See also UsingVersionControl__.
86
87__ http://informatics.kumc.edu/work/wiki/UsingVersionControl
88
89
90Colophon
91--------
92
93This file is marked up using reStructuredText__, an easy-to-read,
94what-you-see-is-what-you-get plaintext markup syntax.
95
96__ http://docutils.sourceforge.net/rst.html
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